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Aim

Theory

Pretest

Procedure

Simulation

Posttest

References

Feedback

Molecular Dynamics Simulation: GROMACS

Choose difficulty:

Beginner

Intermediate

Advanced

Which file format is used carry out molecular dynamics

a: FASTA Explanation

Explanation

b: PDB Explanation

Explanation

c: GENBANK Explanation

Explanation

d: EMBL Explanation

Explanation

First step in molecular dynamics is

a: Clean Data Explanation

Explanation

b: Energy Minimization Explanation

Explanation

c: Equilibration Explanation

Explanation

d: Simulation Explanation

Explanation

Cleaning of data includes, removal of

a: Amino Acids Explanation

Explanation

b: Water molecules Explanation

Explanation

c: Peptides Explanation

Explanation

d: Motifs Explanation

Explanation

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